| Protein ZmE2F3 | |
|---|---|
|
ZmE2F3 is a protein in the E2F-DP family.
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|
| Information | |
| TF Name: | ZmE2F3 |
| Species: | Maize |
| TF Family: | E2F-DP |
| Gene Name(Synonym): | E2F3 |
| Uniprot ID: | A0A1D6PDQ1 |
Protein ZmE2F3
ZmE2F3 is a protein in the E2F-DP family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF00149 | |
| Zm00001eb053560_T001 |  |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d033566 | DAPseq |  |
sequence | fimo | position |
| Zm00001d033566 | DAPseq |  |
sequence | fimo | position |
| Zm00001d033566 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d033566 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmE2F3 is the regulator
Interactions where ZmE2F3 is the target
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Zm00001eb053560_T001 from maize genome v5
Amino Acid Sequence
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MPPSVAPPLSSSPPPASSPSTASTSVRGLATKVEVVEIDLTEEDTSSLAHAPRRRPWTGREERRSIHPAVGCNENLGLLE
PGVFVANLCLRYGFRQLDREEGVLALLELKVRVEADPHGVQDWDPADAAGLAYSGTVPSQQNSALTPDGNYRAPLLGGVP
SAGYLDTTYGYDSTWAQFAWYDGSAYANGQQRTTTTNRFPSSSFSGNGSSARYQNKSSTTQQMGMYRPRACSGYYGYGNE
SQDGTIELNRGPRSGRFKNQKLGVDDSRPGEFSDDMSILQMGRVGEKLDIDFVISTGDNFYKNGLKGVRDQAFKELFMDI
YIAQSLQKPWYSELVDFFFVDTTPFQLEYWTHPGKHRYDWRGVAPRGKYIANLLKDMDVAMKRSTARWKIVVGHHTMRSV
SEHGDTEELLELLLPVLKDNGVDFYINGHDHCLEHISSRDSPLQYFTSGGGSKAWRGVFHPNKDKLRFFYDGQGFMSLQL
NQDQAHFIFYDVFGNILYRWSSRHPQSSTYLNEE
MPPSVAPPLSSSPPPASSPSTASTSVRGLATKVEVVEIDLTEEDTSSLAHAPRRRPWTGREERRSIHPAVGCNENLGLLE
PGVFVANLCLRYGFRQLDREEGVLALLELKVRVEADPHGVQDWDPADAAGLAYSGTVPSQQNSALTPDGNYRAPLLGGVP
SAGYLDTTYGYDSTWAQFAWYDGSAYANGQQRTTTTNRFPSSSFSGNGSSARYQNKSSTTQQMGMYRPRACSGYYGYGNE
SQDGTIELNRGPRSGRFKNQKLGVDDSRPGEFSDDMSILQMGRVGEKLDIDFVISTGDNFYKNGLKGVRDQAFKELFMDI
YIAQSLQKPWYSELVDFFFVDTTPFQLEYWTHPGKHRYDWRGVAPRGKYIANLLKDMDVAMKRSTARWKIVVGHHTMRSV
SEHGDTEELLELLLPVLKDNGVDFYINGHDHCLEHISSRDSPLQYFTSGGGSKAWRGVFHPNKDKLRFFYDGQGFMSLQL
NQDQAHFIFYDVFGNILYRWSSRHPQSSTYLNEE
MPPSVAPPLSSSPPPASSPSTASTSVRGLATKVEVVEIDLTEEDTSSLAHAPRRRPWTGREERRSIHPAVGCNENLGLLE
PGVFVANLCLRYGFRQLDREEGVLALLELKVRVEADPHGVQDWDPADAAGLAYSGTVPSQQNSALTPDGNYRAPLLGGVP
SAGYLDTTYGYDSTWAQFAWYDGSAYANGQQRTTTTNRFPSSSFSGNGSSARYQNKSSTTQQMGMYRPRACSGYYGYGNE
SQDGTIELNRGPRSGRFKNQKLGVDDSRPGEFSDDMSILQMGRVGEKLDIDFVISTGDNFYKNGLKGVRDQAFKELFMDI
YIAQSLQKPWYSELVDFFFVDTTPFQLEYWTHPGKHRYDWRGVAPRGKYIANLLKDMDVAMKRSTARWKIVVGHHTMRSV
SEHGDTEELLELLLPVLKDNGVDFYINGHDHCLEHISSRDSPLQYFTSGGGSKAWRGVFHPNKDKLRFFYDGQGFMSLQL
NQDQAHFIFYDVFGNILYRWSSRHPQSSTYLNEE
MPPSVAPPLSSSPPPASSPSTASTSVRGLATKVEVVEIDLTEEDTSSLAHAPRRRPWTGREERRSIHPAVGCNENLGLLE
PGVFVANLCLRYGFRQLDREEGVLALLELKVRVEADPHGVQDWDPADAAGLAYSGTVPSQQNSALTPDGNYRAPLLGGVP
SAGYLDTTYGYDSTWAQFAWYDGSAYANGQQRTTTTNRFPSSSFSGNGSSARYQNKSSTTQQMGMYRPRACSGYYGYGNE
SQDGTIELNRGPRSGRFKNQKLGVDDSRPGEFSDDMSILQMGRVGEKLDIDFVISTGDNFYKNGLKGVRDQAFKELFMDI
YIAQSLQKPWYSELVDFFFVDTTPFQLEYWTHPGKHRYDWRGVAPRGKYIANLLKDMDVAMKRSTARWKIVVGHHTMRSV
SEHGDTEELLELLLPVLKDNGVDFYINGHDHCLEHISSRDSPLQYFTSGGGSKAWRGVFHPNKDKLRFFYDGQGFMSLQL
NQDQAHFIFYDVFGNILYRWSSRHPQSSTYLNEE
MPPSVAPPLSSSPPPASSPSTASTSVRGLATKVEVVEIDLTEEDTSSLAHAPRRRPWTGREERRSIHPAVGCNENLGLLE
PGVFVANLCLRYGFRQLDREEGVLALLELKVRVEADPHGVQDWDPADAAGLAYSGTVPSQQNSALTPDGNYRAPLLGGVP
SAGYLDTTYGYDSTWAQFAWYDGSAYANGQQRTTTTNRFPSSSFSGNGSSARYQNKSSTTQQMGMYRPRACSGYYGYGNE
SQDGTIELNRGPRSGRFKNQKLGVDDSRPGEFSDDMSILQMGRVGEKLDIDFVISTGDNFYKNGLKGVRDQAFKELFMDI
YIAQSLQKPWYSELVDFFFVDTTPFQLEYWTHPGKHRYDWRGVAPRGKYIANLLKDMDVAMKRSTARWKIVVGHHTMRSV
SEHGDTEELLELLLPVLKDNGVDFYINGHDHCLEHISSRDSPLQYFTSGGGSKAWRGVFHPNKDKLRFFYDGQGFMSLQL
NQDQAHFIFYDVFGNILYRWSSRHPQSSTYLNEE
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00149 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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ATGCCCCCCTCGGTCGCACCCCCTC...
ATGCCCCCCTCGGTCGCACCCCCTCTCTCCTCCTCGCCGCCTCCTGCCTCCTCCCCCTCGACCGCATCTACCTCCGTCCGTGGCCTCGCTACCAAGGTCGAGGTCGTCGAGATCGACCTCACCGAGGAAGACACTAGCTCCTTGGCCCACGCGCCGCGGCGCCGCCCCTGGACCGGTCGAGAGGAGCGGAGATCCATCCATCCGGCCGTCGGCTGTAATGAAAATCTGGGCCTGCTAGAGCCAGGAGTTTTCGTTGCAAATCTGTGTCTCCGCTATGGGTTCAGGCAACTTGATCGTGAAGAAGGTGTACTAGCACTGCTGGAACTGAAGGTGAGGGTGGAGGCTGATCCCCATGGCGTTCAGGATTGGGATCCAGCTGATGCAGCTGGTCTAGCTTACAGTGGAACTGTACCAAGCCAACAAAATTCAGCACTGACGCCTGATGGAAATTATAGGGCGCCCTTGCTAGGTGGAGTTCCTTCTGCTGGTTACCTGGACACGACATATGGGTATGACAGCACATGGGCACAATTTGCATGGTATGATGGCTCTGCTTATGCAAATGGACAGCAAAGAACAACCACAACTAATCGTTTTCCATCCTCGTCATTCAGTGGTAATGGTTCATCAGCAAGATATCAGAACAAGAGCTCCACCACGCAGCAGATGGGTATGTACAGGCCCAGGGCATGTAGTGGATACTATGGTTATGGCAATGAGAGTCAGGATGGAACAATTGAGTTAAACAGAGGTCCTAGATCTGGCCGGTTCAAGAACCAGAAATTAGGAGTCGACGACTCTCGACCCGGAGAATTTAGTGATGATATGTCCATTTTACAGATGGGAAGGGTCGGGGAGAAGCTCGATATCGACTTTGTTATATCCACCGGGGACAACTTCTACAAGAACGGCCTCAAGGGCGTGCGCGACCAGGCATTTAAAGAATTGTTCATGGATATCTACATAGCTCAAAGCTTACAGAAGCCATGGTACTCAGAACTTGTGGACTTCTTCTTTGTCGACACCACTCCATTCCAACTGGAGTATTGGACTCACCCTGGCAAGCATCGTTATGACTGGAGAGGGGTGGCGCCTCGAGGCAAGTACATAGCCAATTTGTTGAAGGATATGGATGTGGCTATGAAGAGATCAACTGCAAGGTGGAAGATTGTGGTTGGGCATCACACCATGAGGAGTGTGAGTGAGCACGGGGACACCGAGGAGCTTCTGGAATTACTACTTCCAGTCCTCAAGGACAATGGCGTCGACTTCTACATCAATGGACACGATCACTGCCTGGAGCACATTAGCAGCAGAGACAGCCCACTCCAGTATTTCACGAGCGGAGGCGGTTCCAAGGCATGGAGAGGAGTCTTCCATCCAAACAAGGACAAGCTCCGGTTCTTCTACGACGGGCAAGGGTTCATGTCCCTCCAGCTGAACCAAGACCAGGCTCACTTCATCTTTTACGACGTTTTCGGGAACATACTGTACCGATGGAGCTCGAGACATCCTCAGTCCTCCACCTATCTCAATGAGGAATAA
GRMZM2G351232_T01 from maize genome v3
Amino Acid Sequence
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MHGVTLIPGVPEKDYARARYRYQNLSKLLPLFLTEQSLHEAKADPAKATTNGVPNGTGHSYSGTVPSQQNSALTPDGNYR
APLLGGVPSAGYLDTTYGYDSTWAQFAWYDGSAYANGQQRTTTTNRFPSSSFSGNGSSARYQNKSSTTQQMLHSCFCPLC
IVFKQAPTYPNRVYPSPRPYTQYENSVKTGLPYGSNGYDSRIYGRCGLGMDNRYRPRACSGYYGYGNESQDGTIELNRGP
RSGRFKNQKLYGHTVTIDPVMVQKRRIYDITNVLEGIGLIEKKLKNNIRWKGVDDSRPGEFSDDMSILQMGRVGEKLDID
FVISTGDNFYKNGLKGVRDQAFKELFMDIYIAQSLQKPWYSELVDFFFVDTTPFQLEYWTHPGKHRYDWRGVAPRGKYIA
NLLKDMDVAMKRSTARWKIVVGHHTMRSVSEHGDTEELLELLLPVLKDNGVDFYINGHDHCLEHISSRDSPLQYFTSGGG
SKAWRGVFHPNKDKLRFFYDGQGFMSLQLNQDQAHFIFYDVFGNILYRWSSRHPQSSTYLNEE
Nucleotide Sequence
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ATGCACGGTGTTACCTTGATACCAG...
ATGCACGGTGTTACCTTGATACCAGGGGTACCTGAAAAAGACTATGCTAGAGCTAGATACCGTTACCAGAATTTATCCAAGCTTTTACCTCTGTTCTTAACTGAACAATCACTTCATGAAGCTAAAGCAGATCCTGCCAAGGCAACTACTAATGGTGTTCCAAATGGTACTGGTCACAGTTACAGTGGAACTGTACCAAGCCAACAAAATTCAGCACTGACGCCTGATGGAAATTATAGGGCGCCCTTGCTAGGTGGAGTTCCTTCTGCTGGTTACCTGGACACGACATATGGGTATGACAGCACATGGGCACAATTTGCATGGTATGATGGCTCTGCTTATGCAAATGGACAGCAAAGAACAACCACAACTAATCGTTTTCCATCCTCGTCATTCAGTGGTAATGGTTCATCAGCAAGATATCAGAACAAGAGCTCCACCACGCAGCAGATGCTTCACTCATGTTTTTGCCCCCTCTGTATTGTCTTCAAGCAGGCTCCTACCTATCCCAATAGGGTGTACCCTAGCCCCCGACCGTACACCCAGTATGAGAATTCAGTAAAAACTGGTCTTCCCTACGGGAGTAACGGTTACGATTCCAGGATATATGGTCGATGTGGTCTTGGTATGGATAACAGGTACAGGCCCAGGGCATGTAGTGGATACTATGGTTATGGCAATGAGAGTCAGGATGGAACAATTGAGTTAAACAGAGGTCCTAGATCTGGCCGGTTCAAGAACCAGAAATTGTACGGTCATACTGTCACTATTGATCCAGTCATGGTACAGAAAAGGCGTATATATGACATCACTAATGTTCTTGAAGGGATAGGACTGATAGAAAAGAAGCTTAAGAACAACATCCGTTGGAAAGGAGTCGACGACTCTCGACCCGGAGAATTTAGTGATGATATGTCCATTTTACAGATGGGAAGGGTCGGGGAGAAGCTCGATATCGACTTTGTTATATCCACCGGGGACAACTTCTACAAGAACGGCCTCAAGGGCGTGCGCGACCAGGCATTTAAAGAATTGTTCATGGATATCTACATAGCTCAAAGCTTACAGAAGCCATGGTACTCAGAACTTGTGGACTTCTTCTTTGTCGACACCACTCCATTCCAACTGGAGTATTGGACTCACCCTGGCAAGCATCGTTATGACTGGAGAGGGGTGGCGCCTCGAGGCAAGTACATAGCCAATTTGTTGAAGGATATGGATGTGGCTATGAAGAGATCAACTGCAAGGTGGAAGATTGTGGTTGGGCATCACACCATGAGGAGTGTGAGTGAGCACGGGGACACCGAGGAGCTTCTGGAATTACTACTTCCAGTCCTCAAGGACAATGGCGTCGACTTCTACATCAATGGACACGATCACTGCCTGGAGCACATTAGCAGCAGAGACAGCCCACTCCAGTATTTCACGAGCGGAGGCGGTTCCAAGGCATGGAGAGGAGTCTTCCATCCAAACAAGGACAAGCTCCGGTTCTTCTACGACGGGCAAGGGTTCATGTCCCTCCAGCTGAACCAAGACCAGGCTCACTTCATCTTTTACGACGTTTTCGGGAACATACTGTACCGATGGAGCTCGAGACATCCTCAGTCCTCCACCTATCTCAATGAGGAATAAATTGGATTGATTTTGCGCCATTGATATGTACAAAA
GRMZM2G351232_T02 from maize genome v3
Amino Acid Sequence
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MDVAMKRSTARWKIVVGHHTMRSVSEHGDTEELLELLLPVLKDNGVDFYINGHDHCLEHISSRDSPLQYFTSGGGSKAWR
GVFHPNKDKLRFFYDGQGFMSLQLNQDQAHFIFYDVFGNILYRWSSRHPQSSTYLNEE
Nucleotide Sequence
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CATGATTACATGGGCAATGCGCTCG...
CATGATTACATGGGCAATGCGCTCGCACAGCTTAGCCCAGTCTTGAGGAAGATCGACGACCGATTCATTTGCATGAGATCGTCATCGTTAACGCAGAACTTGTGGACTTCTTCTTTGTCGACACCACTCCATTCCAACTGGAGTATTGGACTCACCCTGGCAAGCATCGTTATGACTGGAGAGGGGTGGCGCCTCGAGGCAAGTACATAGCCAATTTGTTGAAGGATATGGATGTGGCTATGAAGAGATCAACTGCAAGGTGGAAGATTGTGGTTGGGCATCACACCATGAGGAGTGTGAGTGAGCACGGGGACACCGAGGAGCTTCTGGAATTACTACTTCCAGTCCTCAAGGACAATGGCGTCGACTTCTACATCAATGGACACGATCACTGCCTGGAGCACATTAGCAGCAGAGACAGCCCACTCCAGTATTTCACGAGCGGAGGCGGTTCCAAGGCATGGAGAGGAGTCTTCCATCCAAACAAGGACAAGCTCCGGTTCTTCTACGACGGGCAAGGGTTCATGTCCCTCCAGCTGAACCAAGACCAGGCTCACTTCATCTTTTACGACGTTTTCGGGAACATACTGTACCGATGGAGCTCGAGACATCCTCAGTCCTCCACCTATCTCAATGAGGAATAAATTGGATTGATTTTGCGCCATTGATATGTACAAAA
Zm00001d033566_T001 from maize genome v4
Amino Acid Sequence
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MVQKRRIYDITNVLEGIGLIEKKLKNNIRWKGVDDSRPGEFSDDMSILQMGRVGEKLDIDFVISTGDNFYKNGLKGVRDQ
AFKELFMDIYIAQSLQKPWYSELVDFFFVDTTPFQLEYWTHPGKHRYDWRGVAPRGKYIANLLKDMDVAMKRSTARWKIV
VGHHTMRSVSEHGDTEELLELLLPVLKDNGVDFYINGHDHCLEHISSRDSPLQYFTSGGGSKAWRGVFHPNKDKLRFFYD
GQGFMSLQLNQDQAHFIFYDVFGNILYRWSSRHPQSSTYLNEE
Nucleotide Sequence
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GTAGCTAAAGCAGATCCTGCCAAGG...
GTAGCTAAAGCAGATCCTGCCAAGGCAACTACTAATGGTGTTCCAAATGGTACTGGTCACAGTTACAGTGGAACTGTACCAAGCCAACAAAATTCAGCACTGACGCCTGATGGAAATTATAGGGCGCCCTTGCTAGGTGGAGTTCCTTCTGCTGGTTACCTGGACACGACATATGGGTATGACAGCACATGGGCACAATTTGCATGGTATGATGGCTCTGCTTATGCAAATGGACAGCAAAGAACAACCACAACTAATCGTTTTCCATCCTCGTCATTCAGTGGTAATGGTTCATCAGCAAGATATCAGAACAAGAGCTCCACCACGCAGCAGATGGTACAGAAAAGGCGTATATATGACATCACTAATGTTCTTGAAGGGATAGGACTGATAGAAAAGAAGCTTAAGAACAACATCCGTTGGAAAGGAGTCGACGACTCTCGACCCGGAGAATTTAGTGATGATATGTCCATTTTACAGATGGGAAGGGTCGGGGAGAAGCTCGATATCGACTTTGTTATATCCACCGGGGACAACTTCTACAAGAACGGCCTCAAGGGCGTGCGCGACCAGGCATTTAAAGAATTGTTCATGGATATCTACATAGCTCAAAGCTTACAGAAGCCATGGTACTCAGAACTTGTGGACTTCTTCTTTGTCGACACCACTCCATTCCAACTGGAGTATTGGACTCACCCTGGCAAGCATCGTTATGACTGGAGAGGGGTGGCGCCTCGAGGCAAGTACATAGCCAATTTGTTGAAGGATATGGATGTGGCTATGAAGAGATCAACTGCAAGGTGGAAGATTGTGGTTGGGCATCACACCATGAGGAGTGTGAGTGAGCACGGGGACACCGAGGAGCTTCTGGAATTACTACTTCCAGTCCTCAAGGACAATGGCGTCGACTTCTACATCAATGGACACGATCACTGCCTGGAGCACATTAGCAGCAGAGACAGCCCACTCCAGTATTTCACGAGCGGAGGCGGTTCCAAGGCATGGAGAGGAGTCTTCCATCCAAACAAGGACAAGCTCCGGTTCTTCTACGACGGGCAAGGGTTCATGTCCCTCCAGCTGAACCAAGACCAGGCTCACTTCATCTTTTACGACGTTTTCGGGAACATACTGTACCGATGGAGCTCGAGACATCCTCAGTCCTCCACCTATCTCAATGAGGAATAAATTGGATTGATTTTGCGCCATTGATATGTACAAAACACCGCCTGTCAACTGTCATGTATCT
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